Anant Madabhushi, PhD

Research Program

Cancer Immunology
Email Address

anantm@emory.edu

Biography

Anant Madabhushi, PhD, holds a primary faculty appointment in the Department of Biomedical Engineering and secondary appointments in the Departments of Radiology and Imaging Sciences, Biomedical Informatics (BMI) and Pathology. Dr. Madabhushi serves as executive director for the Emory Empathetic AI for Health Institute.

Prior to joining Emory, Dr. Madabhushi was at Case Western Reserve University, where he was the director of the Center for Computational Imaging and Personalized Diagnostics and Donnell Institute Professor, Department of Biomedical Engineering. He was also a research health scientist at the Louis Stokes Cleveland Veterans Administration Medical Center.

In 2021, he was honored as one of Crain's Cleveland Business Notable Entrepreneurs of the year and also was conferred a Faculty Distinguished Research Award by Case Western Reserve University. His work on using AI for addressing health disparities, especially in identifying differences in appearance of prostate cancer between Black and white men, received national attention in 2020.

Dr. Madabhushi is a Fellow of the American Institute of Medical and Biological Engineering, Fellow of the Institute for Electrical and Electronic Engineers and a Fellow of the National Academy of Inventors. In 2017, he received the IEEE Engineering in Medicine and Biology Society award for technical achievements in computational imaging and digital pathology.

Education

Dr. Madabhushi earned a Master of Science in Biomedical Engineering from the University of Texas at Austin and a PhD in Bioengineering from the University of Pennsylvania.

Titles & Roles

Professor, Wallace H. Coulter Department of Biomedical Engineering

Georgia Institute of Technology and Emory University
Executive Director

Emory Empathetic AI for Health Institute

Research

Dr. Madabhushi has authored more than 450 peer-reviewed publications and holds more than 100 patents either issued or pending in the areas of artificial intelligence, radiomics, computational pathology, medical image analysis and computer vision. His team has been applying these approaches for diagnosis, prognosis and prediction of treatment response across a spectrum of disease including different types of cancers, cardiovascular disease, kidney disease and ophthalmology.

He has secured almost $80 million in grant funding and co-founded three companies. He has been involved in several sponsored research and industry partnerships with medical imaging and pharmaceutical companies. In addition, more than 30 technologies developed by Dr. Madabhushi's team have been licensed.

Publications

Title/Journal	Authors	Publication Date
BEEx is An Open-Source Tool that Evaluates Batch Effects in Medical Images to Enable Multi-center Studies. Cancer research	Y Wu, X Xu, Y Cheng, X Zhang, F Liu, Z Li, L Hu, A Madabhushi, P Gao, Z Liu, C Lu	12/11/2024
Stress testing deep learning models for prostate cancer detection on biopsies and surgical specimens. The Journal of pathology	BT Flannery, HM Sandler, P Lal, MD Feldman, JC Santa-Rosario, T Pathak, T Mirtti, X Farre, R Correa, S Chafe, A Shah, JA Efstathiou, K Hoffman, MA Hallman, M Straza, R Jordan, SL Pugh, F Feng, A Madabhushi	12/11/2024
Artificial Intelligence-Based Feature Analysis of Pulmonary Vein Morphology on Computed Tomography Scans and Risk of Atrial Fibrillation Recurrence After Catheter Ablation: A Multi-Site Study. Circulation. Arrhythmia and electrophysiology	G Asaeikheybari, M El-Harasis, A Gupta, BB Shoemaker, J Barnard, J Hunter, RS Passman, H Sun, HS Kim, T Schilling, W Telfer, B Eldridge, PH Chen, A Midya, B Varghese, SJ Harwood, A Jin, SY Wass, A Izda, K Park, A Abraham, DR Van Wagoner, A Tandon, MK Chung, A Madabhushi	12/03/2024
Machine Vision-Detected Peritumoral Lymphocytic Aggregates Are Associated With Disease-Free Survival in Patients With Papillary Thyroid Carcinoma. Laboratory investigation; a journal of technical methods and pathology	S Monabbati, P Fu, SL Asa, T Pathak, JE Willis, Q Shi, A Madabhushi	11/04/2024
A novel computational pathology approach for identifying gene signatures prognostic of disease-free survival for papillary thyroid carcinomas. European journal of cancer (Oxford, England : 1990)	S Monabbati, S Khalighi, P Fu, Q Shi, SL Asa, A Madabhushi	11/01/2024
Ten challenges and opportunities in computational immuno-oncology. Journal for immunotherapy of cancer	R Bao, A Hutson, A Madabhushi, VD Jonsson, SR Rosario, JS Barnholtz-Sloan, EJ Fertig, H Marathe, L Harris, J Altreuter, Q Chen, J Dignam, AJ Gentles, E Gonzalez-Kozlova, S Gnjatic, E Kim, M Long, M Morgan, E Ruppin, DV Valen, H Zhang, N Vokes, D Meerzaman, S Liu, EM Van Allen, Y Xing	10/26/2024
Artificial intelligence performance in testing microfluidics for point-of-care. Lab on a chip	MT Doganay, P Chakraborty, SM Bommakanti, S Jammalamadaka, D Battalapalli, A Madabhushi, MS Draz	10/22/2024
A New Era of Data-Driven Cancer Research and Care: Opportunities and Challenges. Cancer discovery	F Gomez, AM Danos, G Del Fiol, A Madabhushi, P Tiwari, JF McMichael, S Bakas, J Bian, C Davatzikos, EJ Fertig, J Kalpathy-Cramer, J Kenney, GK Savova, M Yetisgen, EM Van Allen, JL Warner, F Prior, M Griffith, OL Griffith	10/04/2024
Laterality of Radiation Therapy in Breast Cancer is Not Associated With Increased Risk of Coronary Artery Disease in the Contemporary Era. Advances in radiation oncology	L Seth, O Makram, A Essa, V Patel, S Jiang, A Bhave, S Yerraguntla, G Gopu, S Malik, J Swaby, J Rast, CA Padgett, A Shetewi, P Nain, N Weintraub, ED Miller, S Dent, A Barac, R Shiradkar, A Madabhushi, C Ferguson, A Guha	10/01/2024
QuLF-CT: A Radiomics-Based Tool for Quantification of Liver Fat Fraction on Cardiac CT. JACC. Advances	G Modanwal, R Dhamdhere, A Khera, JA de Lemos, R Peshock, J Browning, P Joshi, I Neeland, S Al-Kindi, A Madabhushi	09/01/2024
Towards equitable AI in oncology. Nature reviews. Clinical oncology	VS Viswanathan, V Parmar, A Madabhushi	08/01/2024
A prognostic and predictive computational pathology immune signature for ductal carcinoma in situ: retrospective results from a cohort within the UK/ANZ DCIS trial. The Lancet. Digital health	H Li, A Aggarwal, P Toro, P Fu, SS Badve, J Cuzick, A Madabhushi, MA Thorat	08/01/2024
Combination of optical coherence tomography-derived shape and texture features are associated with development of sub-foveal geographic atrophy in dry AMD. Scientific reports	SS Kar, H Cetin, J Abraham, SK Srivastava, A Madabhushi, JP Ehlers	07/30/2024
Clinical Relevance of Computationally Derived Tubular Features: Spatial Relationships and the Development of Tubulointerstitial Scarring in MCD/FSGS. medRxiv : the preprint server for health sciences	F Fan, Q Liu, J Zee, T Ozeki, D Demeke, Y Yang, AB Farris, B Wang, M Shah, J Jacobs, L Mariani, K Lafata, J Rubin, Y Chen, L Holzman, JB Hodgin, A Madabhushi, L Barisoni, A Janowczyk	07/21/2024
Image analysis Uncovers associations between immune landscape, collagen structure, and neoadjuvant chemotherapy in high-grade serous ovarian carcinomas. Heliyon	A Aggarwal, G Corredor, P Fu, T Pathak, T Mirtti, S Modesitt, TR Soong, A Madabhushi	07/15/2024
Optical coherence tomography-derived texture-based radiomics features identify eyes with intraocular inflammation in the HAWK clinical trial. Heliyon	S Sil Kar, H Cetin, SK Srivastava, A Madabhushi, JP Ehlers	07/15/2024
Deep learning reveals lung shape differences on baseline chest CT between mild and severe COVID-19: A multi-site retrospective study. Computers in biology and medicine	A Hiremath, VS Viswanathan, K Bera, R Shiradkar, L Yuan, K Armitage, R Gilkeson, M Ji, P Fu, A Gupta, C Lu, A Madabhushi	07/01/2024
PatchSorter: a high throughput deep learning digital pathology tool for object labeling. NPJ digital medicine	C Walker, T Talawalla, R Toth, A Ambekar, K Rea, O Chamian, F Fan, S Berezowska, S Rottenberg, A Madabhushi, M Maillard, L Barisoni, HM Horlings, A Janowczyk	06/20/2024
Computational Pathology Assessments of Cardiac Stromal Remodeling: Clinical Correlates and Prognostic Implications in Heart Transplantation. Research square	E Peyster, C Yuan, S Arabyarmohammadi, P Lal, M Feldman, P Fu, K Margulies, A Madabhushi	05/15/2024
An integrated radiology-pathology machine learning classifier for outcome prediction following radical prostatectomy: Preliminary findings. Heliyon	A Hiremath, G Corredor, L Li, P Leo, C Magi-Galluzzi, R Elliott, A Purysko, R Shiradkar, A Madabhushi	04/30/2024
Multi-scale statistical deformation based co-registration of prostate MRI and post-surgical whole mount histopathology. Medical physics	L Li, R Shiradkar, N Gottlieb, C Buzzy, A Hiremath, VS Viswanathan, GT MacLennan, DO Lima, K Gupta, DL Shen, SH Tirumani, C Magi-Galluzzi, A Purysko, A Madabhushi	04/01/2024
Artificial intelligence in neuro-oncology: advances and challenges in brain tumor diagnosis, prognosis, and precision treatment. NPJ precision oncology	S Khalighi, K Reddy, A Midya, KB Pandav, A Madabhushi, M Abedalthagafi	03/29/2024
Beta-defensin index: A functional biomarker for oral cancer detection. Cell reports. Medicine	SK Ghosh, Y Man, A Fraiwan, C Waters, C McKenzie, C Lu, D Pfau, H Kawsar, N Bhaskaran, P Pandiyan, G Jin, F Briggs, CC Zender, R Rezaee, F Panagakos, JE Thuener, J Wasman, A Tang, H Qari, T Wise-Draper, TS McCormick, A Madabhushi, UA Gurkan, A Weinberg	03/19/2024
Image-based multiplex immune profiling of cancer tissues: translational implications. A report of the International Immuno-oncology Biomarker Working Group on Breast Cancer. The Journal of pathology	CA Jahangir, DB Page, G Broeckx, CA Gonzalez, C Burke, C Murphy, JS Reis-Filho, A Ly, PW Harms, RR Gupta, M Vieth, AI Hida, M Kahila, Z Kos, PJ van Diest, S Verbandt, J Thagaard, R Khiroya, K Abduljabbar, G Acosta Haab, B Acs, S Adams, JS Almeida, I Alvarado-Cabrero, F Azmoudeh-Ardalan, S Badve, NB Baharun, ER Bellolio, V Bheemaraju, KR Blenman, L Botinelly Mendonça Fujimoto, O Burgues, A Chardas, MCU Cheang, F Ciompi, LA Cooper, A Coosemans, G Corredor, FL Dantas Portela, F Deman, S Demaria, SN Dudgeon, M Elghazawy, C Fernandez-Martín, S Fineberg, SB Fox, JM Giltnane, S Gnjatic, PI Gonzalez-Ericsson, A Grigoriadis, N Halama, MG Hanna, A Harbhajanka, SN Hart, J Hartman, S Hewitt, HM Horlings, Z Husain, S Irshad, EA Janssen, TR Kataoka, K Kawaguchi, AI Khramtsov, U Kiraz, P Kirtani, LL Kodach, K Korski, G Akturk, E Scott, A Kovács, AV Laenkholm, C Lang-Schwarz, D Larsimont, JK Lennerz, M Lerousseau, X Li, A Madabhushi, SK Maley, V Manur Narasimhamurthy, DK Marks, ES McDonald, R Mehrotra, S Michiels, D Kharidehal, FUAA Minhas, S Mittal, DA Moore, S Mushtaq, H Nighat, T Papathomas, F Penault-Llorca, RD Perera, CJ Pinard, JC Pinto-Cardenas, G Pruneri, L Pusztai, NM Rajpoot, BL Rapoport, TT Rau, JM Ribeiro, D Rimm, A Vincent-Salomon, J Saltz, S Sayed, E Hytopoulos, S Mahon, KP Siziopikou, C Sotiriou, A Stenzinger, MA Sughayer, D Sur, F Symmans, S Tanaka, T Taxter, S Tejpar, J Teuwen, EA Thompson, T Tramm, WT Tran, J van der Laak, GE Verghese, G Viale, N Wahab, T Walter, Y Waumans, HY Wen, W Yang, Y Yuan, J Bartlett, S Loibl, C Denkert, P Savas, S Loi, E Specht Stovgaard, R Salgado, WM Gallagher, A Rahman	03/01/2024
Failing to Make the Grade: Conventional Cardiac Allograft Rejection Grading Criteria Are Inadequate for Predicting Rejection Severity. Circulation. Heart failure	S Arabyarmohammadi, C Yuan, VS Viswanathan, P Lal, MD Feldman, P Fu, KB Margulies, A Madabhushi, EG Peyster	02/01/2024
Rank acquisition impact on radiomics estimation (AсquIRE) in chest CT imaging: A retrospective multi-site, multi-use-case study. Computer methods and programs in biomedicine	D Cherezov, VS Viswanathan, P Fu, A Gupta, A Madabhushi	02/01/2024
Computational pathology identifies immune-mediated collagen disruption to predict clinical outcomes in gynecologic malignancies. Communications medicine	A Aggarwal, S Khalighi, D Babu, H Li, S Azarianpour-Esfahani, G Corredor, P Fu, M Mokhtari, T Pathak, E Thayer, S Modesitt, H Mahdi, S Avril, A Madabhushi	01/03/2024
Texture-Based Radiomic SD-OCT Features Associated With Response to Anti-VEGF Therapy in a Phase III Neovascular AMD Clinical Trial. Translational vision science & technology	S Sil Kar, H Cetin, SK Srivastava, A Madabhushi, JP Ehlers	01/02/2024
Automatic Myeloblast Segmentation in Acute Myeloid Leukemia Images based on Adversarial Feature Learning. Computer methods and programs in biomedicine	Z Zhang, S Arabyarmohammadi, P Leo, H Meyerson, L Metheny, J Xu, A Madabhushi	01/01/2024
Vision Transformers for Computational Histopathology. IEEE reviews in biomedical engineering	H Xu, Q Xu, F Cong, J Kang, C Han, Z Liu, A Madabhushi, C Lu	01/01/2024
Cardiac Radiomics Are Associated With Dyspnea. JACC. Advances	S Kumar, S Al-Kindi, MHE Makhlouf, S Sivakumar, A Midya, G Modanwal, V Rajagopalan, A Tandon, S Rajagopalan, A Madabhushi	01/01/2024
CohortFinder: an open-source tool for data-driven partitioning of digital pathology and imaging cohorts to yield robust machine-learning models. Npj imaging	F Fan, G Martinez, T DeSilvio, J Shin, Y Chen, J Jacobs, B Wang, T Ozeki, MW Lafarge, VH Koelzer, L Barisoni, A Madabhushi, SE Viswanath, A Janowczyk	01/01/2024
Identifying primary tumor site of origin for liver metastases via a combination of handcrafted and deep learning features. The journal of pathology. Clinical research	C Chen, C Lu, V Viswanathan, B Maveal, B Maheshwari, J Willis, A Madabhushi	01/01/2024
Computational Image and Molecular Analysis Reveal Unique Prognostic Features of Immune Architecture in African Versus European American Women with Endometrial Cancer. Research square	A Madabhushi, S Azarianpour-Esfahani, S Khalighi, A Aggarwal, V Viswanathan, P Fu, S Avril	12/29/2023
A Review of AI-Based Radiomics and Computational Pathology Approaches in Triple-Negative Breast Cancer: Current Applications and Perspectives. Clinical breast cancer	G Corredor, S Bharadwaj, T Pathak, VS Viswanathan, P Toro, A Madabhushi	12/01/2023
Recurrent Oropharyngeal Squamous Cell Carcinomas Maintain Anti-tumor Immunity and Multinucleation Levels Following Completion of Radiation. Head and neck pathology	P Castro, G Corredor, C Koyuncu, LA Nordstrom, M Tiji, T Leavitt, JS Lewis, A Madabhushi, MJ Frederick, VC Sandulache	12/01/2023
Visual Assessment of 2-Dimensional Levels Within 3-Dimensional Pathology Data Sets of Prostate Needle Biopsies Reveals Substantial Spatial Heterogeneity. Laboratory investigation; a journal of technical methods and pathology	C Koyuncu, A Janowczyk, X Farre, T Pathak, T Mirtti, PL Fernandez, L Pons, NP Reder, R Serafin, SSL Chow, VS Viswanathan, AK Glaser, LD True, JTC Liu, A Madabhushi	12/01/2023
Intra-nucleus mosaic pattern (InMop) and whole-cell Haralick combined-descriptor for identifying and characterizing acute leukemia blasts on single cell peripheral blood images. Cytometry. Part A : the journal of the International Society for Analytical Cytology	J Tarquino, S Arabyarmohammadi, RE Tejada, A Madabhushi, E Romero	11/01/2023
Single-cell morphological and topological atlas reveals the ecosystem diversity of human breast cancer. Nature communications	S Zhao, DP Chen, T Fu, JC Yang, D Ma, XZ Zhu, XX Wang, YP Jiao, X Jin, Y Xiao, WX Xiao, HY Zhang, H Lv, A Madabhushi, WT Yang, YZ Jiang, J Xu, ZM Shao	10/25/2023
Novel Fractal-Based Sub-RPE Compartment OCT Radiomics Biomarkers Are Associated With Subfoveal Geographic Atrophy in Dry AMD. IEEE transactions on bio-medical engineering	SS Kar, H Cetin, J Abraham, SK Srivastava, J Whitney, A Madabhushi, JP Ehlers	10/01/2023
Machine Learning Approach for Rapid, Accurate Point-of-Care Prediction of M-Spike Values in Multiple Myeloma. JCO clinical cancer informatics	E Malek, GM Wang, C Tatsuoka, J Cullen, A Madabhushi, JJ Driscoll	09/01/2023
Recurrent oropharyngeal squamous cell carcinomas maintain anti-tumor immunity and multinucleation levels following completion of radiation. Research square	P Castro, G Corredor, C Koyuncu, LA Nordstrom, M Tiji, T Leavitt, JS Lewis, A Madabhushi, MJ Frederick, VC Sandulache	08/21/2023
Radiomic predicts early response to CDK4/6 inhibitors in hormone receptor positive metastatic breast cancer. NPJ breast cancer	M Khorrami, VS Viswanathan, P Reddy, N Braman, S Kunte, A Gupta, J Abraham, AJ Montero, A Madabhushi	08/11/2023
Machine learning driven index of tumor multinucleation correlates with survival and suppressed anti-tumor immunity in head and neck squamous cell carcinoma patients. Oral oncology	CF Koyuncu, MJ Frederick, LDR Thompson, G Corredor, S Khalighi, Z Zhang, B Song, C Lu, R Nag, V Sankar Viswanathan, M Gilkey, K Yang, SA Koyfman, DJ Chute, P Castro, JS Lewis, A Madabhushi, VC Sandulache	08/01/2023
Nondestructive 3D pathology with analysis of nuclear features for prostate cancer risk assessment. The Journal of pathology	R Serafin, C Koyuncu, W Xie, H Huang, AK Glaser, NP Reder, A Janowczyk, LD True, A Madabhushi, JT Liu	08/01/2023
Pitfalls in machine learning-based assessment of tumor-infiltrating lymphocytes in breast cancer: A report of the International Immuno-Oncology Biomarker Working Group on Breast Cancer. The Journal of pathology	J Thagaard, G Broeckx, DB Page, CA Jahangir, S Verbandt, Z Kos, R Gupta, R Khiroya, K Abduljabbar, G Acosta Haab, B Acs, G Akturk, JS Almeida, I Alvarado-Cabrero, M Amgad, F Azmoudeh-Ardalan, S Badve, NB Baharun, E Balslev, ER Bellolio, V Bheemaraju, KR Blenman, L Botinelly Mendonça Fujimoto, N Bouchmaa, O Burgues, A Chardas, M Chon U Cheang, F Ciompi, LA Cooper, A Coosemans, G Corredor, AB Dahl, FL Dantas Portela, F Deman, S Demaria, J Doré Hansen, SN Dudgeon, T Ebstrup, M Elghazawy, C Fernandez-Martín, SB Fox, WM Gallagher, JM Giltnane, S Gnjatic, PI Gonzalez-Ericsson, A Grigoriadis, N Halama, MG Hanna, A Harbhajanka, SN Hart, J Hartman, S Hauberg, S Hewitt, AI Hida, HM Horlings, Z Husain, E Hytopoulos, S Irshad, EA Janssen, M Kahila, TR Kataoka, K Kawaguchi, D Kharidehal, AI Khramtsov, U Kiraz, P Kirtani, LL Kodach, K Korski, A Kovács, AV Laenkholm, C Lang-Schwarz, D Larsimont, JK Lennerz, M Lerousseau, X Li, A Ly, A Madabhushi, SK Maley, V Manur Narasimhamurthy, DK Marks, ES McDonald, R Mehrotra, S Michiels, FUAA Minhas, S Mittal, DA Moore, S Mushtaq, H Nighat, T Papathomas, F Penault-Llorca, RD Perera, CJ Pinard, JC Pinto-Cardenas, G Pruneri, L Pusztai, A Rahman, NM Rajpoot, BL Rapoport, TT Rau, JS Reis-Filho, JM Ribeiro, D Rimm, A Roslind, A Vincent-Salomon, M Salto-Tellez, J Saltz, S Sayed, E Scott, KP Siziopikou, C Sotiriou, A Stenzinger, MA Sughayer, D Sur, S Fineberg, F Symmans, S Tanaka, T Taxter, S Tejpar, J Teuwen, EA Thompson, T Tramm, WT Tran, J van der Laak, PJ van Diest, GE Verghese, G Viale, M Vieth, N Wahab, T Walter, Y Waumans, HY Wen, W Yang, Y Yuan, RM Zin, S Adams, J Bartlett, S Loibl, C Denkert, P Savas, S Loi, R Salgado, E Specht Stovgaard	08/01/2023
Spatial analyses of immune cell infiltration in cancer: current methods and future directions: A report of the International Immuno-Oncology Biomarker Working Group on Breast Cancer. The Journal of pathology	DB Page, G Broeckx, CA Jahangir, S Verbandt, RR Gupta, J Thagaard, R Khiroya, Z Kos, K Abduljabbar, G Acosta Haab, B Acs, G Akturk, JS Almeida, I Alvarado-Cabrero, F Azmoudeh-Ardalan, S Badve, NB Baharun, ER Bellolio, V Bheemaraju, KR Blenman, L Botinelly Mendonça Fujimoto, N Bouchmaa, O Burgues, MCU Cheang, F Ciompi, LA Cooper, A Coosemans, G Corredor, FL Dantas Portela, F Deman, S Demaria, SN Dudgeon, M Elghazawy, S Ely, C Fernandez-Martín, S Fineberg, SB Fox, WM Gallagher, JM Giltnane, S Gnjatic, PI Gonzalez-Ericsson, A Grigoriadis, N Halama, MG Hanna, A Harbhajanka, A Hardas, SN Hart, J Hartman, S Hewitt, AI Hida, HM Horlings, Z Husain, E Hytopoulos, S Irshad, EA Janssen, M Kahila, TR Kataoka, K Kawaguchi, D Kharidehal, AI Khramtsov, U Kiraz, P Kirtani, LL Kodach, K Korski, A Kovács, AV Laenkholm, C Lang-Schwarz, D Larsimont, JK Lennerz, M Lerousseau, X Li, A Ly, A Madabhushi, SK Maley, V Manur Narasimhamurthy, DK Marks, ES McDonald, R Mehrotra, S Michiels, FUAA Minhas, S Mittal, DA Moore, S Mushtaq, H Nighat, T Papathomas, F Penault-Llorca, RD Perera, CJ Pinard, JC Pinto-Cardenas, G Pruneri, L Pusztai, A Rahman, NM Rajpoot, BL Rapoport, TT Rau, JS Reis-Filho, JM Ribeiro, D Rimm, A Vincent-Salomon, M Salto-Tellez, J Saltz, S Sayed, KP Siziopikou, C Sotiriou, A Stenzinger, MA Sughayer, D Sur, F Symmans, S Tanaka, T Taxter, S Tejpar, J Teuwen, EA Thompson, T Tramm, WT Tran, J van der Laak, PJ van Diest, GE Verghese, G Viale, M Vieth, N Wahab, T Walter, Y Waumans, HY Wen, W Yang, Y Yuan, S Adams, JMS Bartlett, S Loibl, C Denkert, P Savas, S Loi, R Salgado, E Specht Stovgaard	08/01/2023
CT radiomic signature predicts survival and chemotherapy benefit in stage I and II HPV-associated oropharyngeal carcinoma. NPJ precision oncology	B Song, K Yang, VS Viswanathan, X Wang, J Lee, S Stock, P Fu, C Lu, S Koyfman, JS Lewis, A Madabhushi	06/02/2023
Can Radiomics Bridge the Gap Between Immunotherapy and Precision Medicine in Lung Cancer? Journal of thoracic oncology : official publication of the International Association for the Study of Lung Cancer	L Delasos, A Madabhushi, PD Patil	06/01/2023
Deep computational image analysis of immune cell niches reveals treatment-specific outcome associations in lung cancer. NPJ precision oncology	C Barrera, G Corredor, VS Viswanathan, R Ding, P Toro, P Fu, C Buzzy, C Lu, P Velu, P Zens, S Berezowska, M Belete, D Balli, H Chang, V Baxi, K Syrigos, DL Rimm, V Velcheti, K Schalper, E Romero, A Madabhushi	06/01/2023
Computational pathology improves risk stratification of a multi-gene assay for early stage ER+ breast cancer. NPJ breast cancer	Y Chen, H Li, A Janowczyk, P Toro, G Corredor, J Whitney, C Lu, CF Koyuncu, M Mokhtari, C Buzzy, S Ganesan, MD Feldman, P Fu, H Corbin, A Harbhajanka, H Gilmore, LJ Goldstein, NE Davidson, S Desai, V Parmar, A Madabhushi	05/17/2023
Clinical Relevance of Computationally Derived Attributes of Peritubular Capillaries from Kidney Biopsies. Kidney360	Y Chen, J Zee, AR Janowczyk, J Rubin, P Toro, KJ Lafata, LH Mariani, LB Holzman, JB Hodgin, A Madabhushi, L Barisoni	05/01/2023
Automated analysis of computerized morphological features of cell clusters associated with malignancy on bile duct brushing whole slide images. Cancer medicine	S Monabbati, P Leo, K Bera, CW Michael, BG Nezami, A Harbhajanka, A Madabhushi	03/01/2023
Integrating Radiomics With Clinicoradiological Scoring Can Predict High-Risk Patients Who Need Surgery in Crohn's Disease: A Pilot Study. Inflammatory bowel diseases	P Chirra, A Sharma, K Bera, HM Cohn, JA Kurowski, K Amann, MJ Rivero, A Madabhushi, C Lu, R Paspulati, SL Stein, JA Katz, SE Viswanath, M Dave	03/01/2023
Multi-site cross-organ calibrated deep learning (MuSClD): Automated diagnosis of non-melanoma skin cancer. Medical image analysis	Y Zhou, C Koyuncu, C Lu, R Grobholz, I Katz, A Madabhushi, A Janowczyk	02/01/2023
Novel radiomic analysis on bi-parametric MRI for characterizing differences between MR non-visible and visible clinically significant prostate cancer. European journal of radiology open	L Li, R Shiradkar, SH Tirumani, LK Bittencourt, P Fu, A Mahran, C Buzzy, PD Stricker, AR Rastinehad, C Magi-Galluzzi, L Ponsky, E Klein, AS Purysko, A Madabhushi	01/01/2023
Delta radiomic patterns on serial bi-parametric MRI are associated with pathologic upgrading in prostate cancer patients on active surveillance: preliminary findings. Frontiers in oncology	A Midya, A Hiremath, J Huber, V Sankar Viswanathan, D Omil-Lima, A Mahran, LK Bittencourt, S Harsha Tirumani, L Ponsky, R Shiradkar, A Madabhushi	01/01/2023
OCT-Derived Radiomic Features Predict Anti-VEGF Response and Durability in Neovascular Age-Related Macular Degeneration. Ophthalmology science	SS Kar, H Cetin, L Lunasco, TK Le, R Zahid, X Meng, SK Srivastava, A Madabhushi, JP Ehlers	12/01/2022
A tumor vasculature-based imaging biomarker for predicting response and survival in patients with lung cancer treated with checkpoint inhibitors. Science advances	M Alilou, M Khorrami, P Prasanna, K Bera, A Gupta, VS Viswanathan, P Patil, PD Velu, P Fu, V Velcheti, A Madabhushi	11/25/2022
Image analysis reveals differences in tumor multinucleations in Black and White patients with human papillomavirus-associated oropharyngeal squamous cell carcinoma. Cancer	CF Koyuncu, R Nag, C Lu, G Corredor, VS Viswanathan, VC Sandulache, P Fu, K Yang, Q Pan, Z Zhang, J Xu, DJ Chute, WL Thorstad, F Faraji, JA Bishop, M Mehrad, PD Castro, AG Sikora, LDR Thompson, RD Chernock, KA Lang Kuhs, JK Wasman, JR Luo, DJ Adelstein, SA Koyfman, JS Lewis, A Madabhushi	11/01/2022
Deep-learning-based hepatic fat assessment (DeHFt) on non-contrast chest CT and its association with disease severity in COVID-19 infections: A multi-site retrospective study. EBioMedicine	G Modanwal, S Al-Kindi, J Walker, R Dhamdhere, L Yuan, M Ji, C Lu, P Fu, S Rajagopalan, A Madabhushi	11/01/2022
Novel Radiomic Measurements of Tumor-Associated Vasculature Morphology on Clinical Imaging as a Biomarker of Treatment Response in Multiple Cancers. Clinical cancer research : an official journal of the American Association for Cancer Research	N Braman, P Prasanna, K Bera, M Alilou, M Khorrami, P Leo, M Etesami, M Vulchi, P Turk, A Gupta, P Jain, P Fu, N Pennell, V Velcheti, J Abraham, D Plecha, A Madabhushi	10/14/2022
Oropharyngeal cancer outcomes correlate with p16 status, multinucleation and immune infiltration. Modern pathology : an official journal of the United States and Canadian Academy of Pathology, Inc	DC Wilde, PD Castro, K Bera, S Lai, A Madabhushi, G Corredor, C Koyuncu, JS Lewis, C Lu, MJ Frederick, AM Frederick, AE Haugen, JP Zevallos, EM Sturgis, J Shi, AT Huang, DJ Hernandez, HD Skinner, JO Kemnade, W Yu, AG Sikora, VC Sandulache	08/01/2022
A machine learning model for separating epithelial and stromal regions in oral cavity squamous cell carcinomas using H&E-stained histology images: A multi-center, retrospective study. Oral oncology	Y Wu, CF Koyuncu, P Toro, G Corredor, Q Feng, C Buzzy, M Old, T Teknos, ST Connelly, RC Jordan, KA Lang Kuhs, C Lu, JS Lewis, A Madabhushi	08/01/2022
Radiomic Deformation and Textural Heterogeneity (R-DepTH) Descriptor to Characterize Tumor Field Effect: Application to Survival Prediction in Glioblastoma. IEEE transactions on medical imaging	M Ismail, P Prasanna, K Bera, V Statsevych, V Hill, G Singh, S Partovi, N Beig, S McGarry, P Laviolette, M Ahluwalia, A Madabhushi, P Tiwari	07/01/2022
The state of the art for artificial intelligence in lung digital pathology. The Journal of pathology	VS Viswanathan, P Toro, G Corredor, S Mukhopadhyay, A Madabhushi	07/01/2022
Image analysis reveals molecularly distinct patterns of TILs in NSCLC associated with treatment outcome. NPJ precision oncology	R Ding, P Prasanna, G Corredor, C Barrera, P Zens, C Lu, P Velu, P Leo, N Beig, H Li, P Toro, S Berezowska, V Baxi, D Balli, M Belete, DL Rimm, V Velcheti, K Schalper, A Madabhushi	06/03/2022
Spatial interplay patterns of cancer nuclei and tumor-infiltrating lymphocytes (TILs) predict clinical benefit for immune checkpoint inhibitors. Science advances	X Wang, C Barrera, K Bera, VS Viswanathan, S Azarianpour-Esfahani, C Koyuncu, P Velu, MD Feldman, M Yang, P Fu, KA Schalper, H Mahdi, C Lu, V Velcheti, A Madabhushi	06/03/2022
RADIomic Spatial TexturAl Descriptor (RADISTAT): Quantifying Spatial Organization of Imaging Heterogeneity Associated With Tumor Response to Treatment. IEEE journal of biomedical and health informatics	JT Antunes, M Ismail, I Hossain, Z Wang, P Prasanna, A Madabhushi, P Tiwari, SE Viswanath	06/01/2022
Role of tumor infiltrating lymphocytes and spatial immune heterogeneity in sensitivity to PD-1 axis blockers in non-small cell lung cancer. Journal for immunotherapy of cancer	M Lopez de Rodas, V Nagineni, A Ravi, IJ Datar, M Mino-Kenudson, G Corredor, C Barrera, L Behlman, DL Rimm, RS Herbst, A Madabhushi, JW Riess, V Velcheti, MD Hellmann, J Gainor, KA Schalper	06/01/2022
Computational Imaging Biomarker Correlation with Intraocular Cytokine Expression in Diabetic Macular Edema: Radiomics Insights from the IMAGINE Study. Ophthalmology science	SS Kar, J Abraham, CC Wykoff, DD Sevgi, L Lunasco, DM Brown, SK Srivastava, A Madabhushi, JP Ehlers	06/01/2022
Response to: Correspondence on 'Novel imaging biomarkers predict outcomes in stage III unresectable non-small cell lung cancer treated with chemoradiation and durvalumab' by Zheng et al. Journal for immunotherapy of cancer	VS Viswanathan, M Khorrami, K Jazieh, P Fu, N Pennell, A Madabhushi	05/01/2022
Novel Imaging Biomarkers to Assess Oncologic Treatment-Related Changes. American Society of Clinical Oncology educational book. American Society of Clinical Oncology. Annual Meeting	VS Viswanathan, A Gupta, A Madabhushi	04/01/2022
Fifty years of SPIE Medical Imaging proceedings papers. Journal of medical imaging (Bellingham, Wash.)	RM Nishikawa, TM Deserno, A Madabhushi, EA Krupinski, RM Summers, C Hoeschen, C Mello-Thoms, KJ Myers, MA Kupinski, JH Siewerdsen	02/01/2022
Machine learning derived ECG risk score improves cardiovascular risk assessment in conjunction with coronary artery calcium scoring. Frontiers in cardiovascular medicine	S Siva Kumar, S Al-Kindi, N Tashtish, V Rajagopalan, P Fu, S Rajagopalan, A Madabhushi	01/01/2022
Novel MRI deformation-heterogeneity radiomic features are associated with molecular subgroups and overall survival in pediatric medulloblastoma: Preliminary findings from a multi-institutional study. Frontiers in oncology	S Iyer, M Ismail, B Tamrazi, R Salloum, P de Blank, A Margol, R Correa, J Chen, K Bera, V Statsevych, ML Ho, P Vaidya, R Verma, D Hawes, A Judkins, P Fu, A Madabhushi, P Tiwari	01/01/2022
Prostate Surface Distension and Tumor Texture Descriptors From Pre-Treatment MRI Are Associated With Biochemical Recurrence Following Radical Prostatectomy: Preliminary Findings. Frontiers in oncology	R Shiradkar, S Ghose, A Mahran, L Li, I Hubbard, P Fu, SH Tirumani, L Ponsky, A Purysko, A Madabhushi	01/01/2022